Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015795498.1_cds_XP_016444363.1_3858
CDS Infomation

[gene=LOC107769641] [db_xref=GeneID:107769641] [protein=transmembrane protein 87A-like] [protein_id=XP_016444363.1] [location=complement(join(49454..49619,50065..50201,50846..50941,51485..52403,53028..53233))] [gbkey=CDS]
Sequence

ATGCGGTGGTCGAAGTCAGCTGGAGCTTCAGGAGTAATCCTACTGTGGTTATGTTTGCTC
CATTTCACAGAAGCTTCAGTGCATGACTATAATGGGGAGAAATTCGTGAGCAAAGGCAAT
GCATTTGTTGTCCACGGTGGCAGCGAAGGAATTTACGCCTCTACTCCTAACTTCACTGAT
TCTCCTTCCTCTGACTCTTTCATTCGGTTTGAAAAGATTGTATTTCGGAGGCCAAAAGAA
TTCTCAAACTTTAGTTCAGACCCAATTCATGCAATTGTTTTTGAGGTGGATGATCGAGAG
TCAATTGGGGGCTCAGCCTACGGTGGCCAAAGAGCTGTTTGTTGCACAGCAGATCTTGCA
AAACTTGGAGTTTGTACACAAGGGCAAATTATTCACCGCCCATCTGCTAATAATCCTGGA
TGGCCTAAAGTTTTTAGTGCCTCATTCAGCACTGATGAGGTTGAAGTAGCACTGCAGTCA
AGATCGATCCCTATTACAAAAACTGGGATGTATAATGTGTATTTTATTCACTGTGAACCA
TATCTTAAGGATATTAATGTTGAAGGGAAAACCATATGGAAGAATCCTACTGGTTACCTA
CCTGGTAGAATGGCCCCCCTTATGAACTTCTATGGGTTCATGTCTCTTGCATTCGTGTTA
CTTGGGATCTTTTGGTTTTCGCAGTATGCAAGATTCTGGAGAGAAGTTATTCCTCTACAA
AATTGTATTACACTCGTGATAACATTGGGCATGCTTGAAATGGCCTTTTGGTACTTTGAC
TATGCTGAATTCAATGAAACTGGAGTCAGGCCCACTGGTACCACTGTATGGGCTGTGACC
TTTGGTACAGTAAAGCGCACAGTTTCACGTTTGGTCATTCTGATGGTCTCTATGGGCTTT
GGTGTCGTTAGACCTACTTTAGGTGGTCTCACATCGAAGGTCCTTTTGCTTGGAGGAACT
TTCTTTTTGGCTTCTGAAGTGCTTGAACTGGTAGAAAATGTTGGTGCAGTCAGTGATTTC
TCAGGAAAAGCAAGGATATTTTTCGTACTTCCTGTGGCATTCTTGGATGCTTTCTTTATC
CTTTGGATATTCACCTCCCTGTCAGCAACTTTGAATAAGCTTCAGGCTAGAAGGTTGTTG
GCCAAATTAGACATTTACCGGAAGTTCACAAATGCATTGGTCGTCGCTGTTATTGTATCT
GTTGGATGGACGTGCTACGAGCTATACTTCAAGTCCACTGATGTGTACAATGAGCGATGG
CAAAATGCCTGGATTATTCCTGCCTTCTGGCAAGTACTATCTTTCTCTCTCCTTTGCATA
ATCTGCGCTCTTTGGGCACCATCTCAAAACTCCATGAGATATGCCTATTCCGATGATGGT
GAAGAGTTCGACAAGGACGTTACATTGACACTCATAAAGCCCTCCCCTCTGCCAAAGGAT
GTTAGAAGCCAACCTGAAGTGAGGCCAACACTGGGTAACGATGGGTTCCCTAATGGTGAT
GAGGTAGAAGACAAGACAGAGTAA

Peptide Sequence

PEP ID

XP_016444363.1
PEP Infomation

PREDICTED: transmembrane protein 87A-like [Nicotiana tabacum]
Sequence

MRWSKSAGASGVILLWLCLLHFTEASVHDYNGEKFVSKGNAFVVHGGSEGIYASTPNFTD
SPSSDSFIRFEKIVFRRPKEFSNFSSDPIHAIVFEVDDRESIGGSAYGGQRAVCCTADLA
KLGVCTQGQIIHRPSANNPGWPKVFSASFSTDEVEVALQSRSIPITKTGMYNVYFIHCEP
YLKDINVEGKTIWKNPTGYLPGRMAPLMNFYGFMSLAFVLLGIFWFSQYARFWREVIPLQ
NCITLVITLGMLEMAFWYFDYAEFNETGVRPTGTTVWAVTFGTVKRTVSRLVILMVSMGF
GVVRPTLGGLTSKVLLLGGTFFLASEVLELVENVGAVSDFSGKARIFFVLPVAFLDAFFI
LWIFTSLSATLNKLQARRLLAKLDIYRKFTNALVVAVIVSVGWTCYELYFKSTDVYNERW
QNAWIIPAFWQVLSFSLLCIICALWAPSQNSMRYAYSDDGEEFDKDVTLTLIKPSPLPKD
VRSQPEVRPTLGNDGFPNGDEVEDKTE

Transcript Sequence

Gene sequence data has not been registered.